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Mauricio Faria de Oliveira
422c3f7fc5
When running lsf_startup
[root@xcat-mn lsf]# updatenode $lsf_master --scripts lsf_startup
<...>
p8r1n1: Mon Nov 30 21:30:58 EST 2015 Running postscript: lsf_startup
p8r1n1: INFO: Run hostsetup on each node.
p8r1n1: ./lsf_startup: line 48: /usr/share/lsf//install/hostsetup: No such file or directory
<...>
It is because this expression is broken; no mention to / as field separator.
# grep '^LSF_VERSION' /install/postscripts/lsf_startup LSF_VERSION=`find /$LSF_TOP -name hostsetup|head -1|awk '{print $5}'`
See:
[root@p8r1n1 ~]# LSF_TOP="/usr/share/lsf"
[root@p8r1n1 ~]# find /$LSF_TOP -name hostsetup | head -1
//usr/share/lsf/9.1/install/hostsetup
[root@p8r1n1 ~]# find /$LSF_TOP -name hostsetup|head -1|awk '{print $5}'
[root@p8r1n1 ~]#
Additionally, it would fail if the version was not exactly the 5th field, which may occur if the user doesn't use /usr/share/lsf for LSF_TOP. And there's even a leading / before $LSF_TOP (ie, /$LSF_TOP).. and what if the user sets LSF_TOP with a trailing / ?
So, lets make this independent of leading slashes and trailing slashes.
LSF_VERSION="$(find /$LSF_TOP -path "*/install/hostsetup" | grep -o "/[^/]\+/install/hostsetup" | cut -d/ -f2)"
It works on the usual and non-usual cases:
[root@p8r1n1 ~]# LSF_TOP=/usr/share/lsf
[root@p8r1n1 ~]# find /$LSF_TOP -path '*/install/hostsetup' | grep -o '/[^/]\+/install/hostsetup' | cut -d/ -f2
9.1
[root@p8r1n1 ~]# LSF_TOP=/test/some/other/dir/for/lsf
[root@p8r1n1 ~]# mkdir -p $LSF_TOP/9.1/install
[root@p8r1n1 ~]# touch $LSF_TOP/9.1/install/hostsetup
[root@p8r1n1 ~]# find /$LSF_TOP -path "*/install/hostsetup" | grep -o '/[^/]\+/install/hostsetup' | cut -d/ -f2
9.1
120 lines
2.9 KiB
Bash
120 lines
2.9 KiB
Bash
#!/bin/bash
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#README################################################################
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# (1)lsf_startup should be ran after lsf is installed, so it should be ran after install_lsf script
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# (2)lsf_startup use the same install.config file with install_lsf, install.config should be in the same directory with install_lsf and lsf_startup scripts.
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# The format of install.config file, see more details in install_lsf README
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# cat install.config
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# LSF_TOP=""
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# LSF_ADMINS=""
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# LSF_CLUSTER_NAME=""
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# LSF_MASTER_LIST=""
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# LSF_ENTITLEMENT_FILE="NEED A FULL PATH OF THE FILE"
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# LSF_TARDIR=""
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# (3)Run this script on all lsf cluster nodes,you can also use "updatenode <noderange> -P lsf_startup" to execute this script
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#
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#README################################################################
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#need install.config
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INSTALL_CONFIG_FILE=`pwd`/install.config
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. $INSTALL_CONFIG_FILE
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echo "INFO: Run hostsetup on each node."
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find /$LSF_TOP -name hostsetup > /dev/null
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if [[ $? -ne 0 ]]
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then
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echo "Error : there is no hostsetup, check if lsf install is installed or not."
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exit 1
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fi
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#get lsf main version,
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LSF_VERSION="$(find /$LSF_TOP -path "*/install/hostsetup" | grep -o "/[^/]\+/install/hostsetup" | cut -d/ -f2)"
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if [[ x${LSF_ADD_SERVERS} != x ]]; then
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ALL_LSF_NODES=${LSF_MASTER_LIST}' '${LSF_ADD_SERVERS}
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else
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ALL_LSF_NODES=${LSF_MASTER_LIST}
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fi
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for item in $ALL_LSF_NODES
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do
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if [[ x${item} == x$NODE ]]
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then
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$LSF_TOP/$LSF_VERSION/install/hostsetup --top="$LSF_TOP" --boot="y"
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fi
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done
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# Set your LSF environment"
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echo "INFO: Set LSF environment for root and LSF_ADMINS"
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for lsfnode in $ALL_LSF_NODES
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do
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if [[ x${lsfnode} == x$NODE ]]
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then
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echo ". $LSF_TOP/conf/profile.lsf" >> /root/.profile
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fi
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done
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#change .profile for every lsf admin user
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for LSF_ADMIN_USER in $LSF_ADMINS ; do
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LSF_ADMIN_USER_HOMEDIR=`grep $LSF_ADMIN_USER: /etc/passwd | cut -d ':' -f 6`
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grep "profile.lsf" $LSF_ADMIN_USER_HOMEDIR/.profile > /dev/null
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if [[ $? -eq 0 ]]
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then
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sed -i '/profile.lsf/d' $LSF_ADMIN_USER_HOMEDIR/.profile
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fi
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for lsfnode in $ALL_LSF_NODES
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do
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if [[ x${lsfnode} == x$NODE ]]
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then
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echo ". $LSF_TOP/conf/profile.lsf" >> $LSF_ADMIN_USER_HOMEDIR/.profile
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fi
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done
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done
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# Startup LSF CLUSTER
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echo "INFO: Start LSF Cluster."
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. $LSF_TOP/conf/profile.lsf
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lsadminpath="lsadmin"
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if [[ x${lsadminpath} == x ]]
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then
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echo "Error:there is no lsadmin."
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else
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$lsadminpath limstartup
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if [[ $? -ne 0 ]]
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then
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echo "lsadmin limstartup fail."
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fi
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$lsadminpath resstartup
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if [[ $? -ne 0 ]]
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then
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echo "lsadmin resstartup fail."
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fi
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fi
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badminpath="badmin"
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if [[ x${badminpath} == x ]]
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then
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echo "Error:there is no badmin."
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else
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$badminpath hstartup
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if [[ $? -ne 0 ]]
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then
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echo "Error : badmin hstartup faile. "
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fi
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fi
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